Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RORBRAR related orphan receptor B. (427 aa)    
Predicted Functional Partners:
NCOA1
Nuclear receptor coactivator 1.
    
 0.921
GPI
Glucose-6-phosphate isomerase.
    
   0.796
NCOR1
Nuclear receptor corepressor 1.
    
 0.784
NPAS2
Neuronal PAS domain protein 2.
    
 0.732
CLOCK
Clock circadian regulator.
    
 0.732
ENSSARP00000009875
annotation not available
    
 0.732
CRY1
Cryptochrome circadian regulator 1.
    
 
 0.716
CRY2
Cryptochrome circadian regulator 2.
    
 
 0.660
NCOA3
Nuclear receptor coactivator 3.
    
 0.649
NCOA2
Nuclear receptor coactivator 2.
    
 0.649
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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