STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC18Coiled-coil domain containing 18. (1444 aa)    
Predicted Functional Partners:
CCDC14
Coiled-coil domain containing 14.
   
 
 0.687
TMEM71
Transmembrane protein 71.
      
 0.661
PRADC1
Protease associated domain containing 1.
      
 0.637
PRSS37
Serine protease 37.
      
 0.606
RAB42
RAB42, member RAS oncogene family.
    
 0.598
ABCD3
ATP binding cassette subfamily D member 3.
      
 0.573
PIBF1
Progesterone immunomodulatory binding factor 1.
    
 
 0.567
SLC44A5
Solute carrier family 44 member 5.
      
 0.539
UACA
Uveal autoantigen with coiled-coil domains and ankyrin repeats.
    
 
 0.536
ENSSARP00000010561
annotation not available
      
 0.534
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.