STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001267annotation not available (1046 aa)    
Predicted Functional Partners:
GPKOW
G-patch domain and KOW motifs.
    
 0.999
PRPF8
pre-mRNA processing factor 8.
   
 0.998
ENSSARP00000003402
annotation not available
   
 0.998
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
  
 0.998
CDC5L
Cell division cycle 5 like.
   
 0.997
ENSSARP00000004652
annotation not available
   
 0.996
RNF113A
Ring finger protein 113A.
    
 0.996
CWC27
CWC27 spliceosome associated cyclophilin.
  
 0.995
ENSSARP00000012285
annotation not available
   
 0.995
SF3A1
Splicing factor 3a subunit 1.
   
 0.994
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.