Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPT1BCarnitine palmitoyltransferase 1B. (712 aa)    
Predicted Functional Partners:
ACSL5
acyl-CoA synthetase long chain family member 5.
     
 0.924
ENSSARP00000009479
annotation not available
   
 
 0.920
CPT1C
Carnitine palmitoyltransferase 1C.
  
  
 
0.903
ENSSARP00000007429
annotation not available
    
 
 0.765
ACADM
acyl-CoA dehydrogenase medium chain.
      
 0.686
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.683
ENSSARP00000004566
annotation not available
     
 0.675
ENSSARP00000006391
annotation not available
      
 0.621
PPARGC1A
PPARG coactivator 1 alpha.
    
 
 0.613
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
     
  0.604
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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