STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001271annotation not available (339 aa)    
Predicted Functional Partners:
FYCO1
FYVE and coiled-coil domain containing 1.
      
 0.737
ITM2B
Integral membrane protein 2B.
    
 
 0.695
JAGN1
Jagunal homolog 1.
   
 
 0.645
ENSSARP00000004929
annotation not available
    
   0.631
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
  
 0.624
CHP1
Calcineurin like EF-hand protein 1.
      
 0.600
VAMP8
Vesicle associated membrane protein 8.
    
 
 0.598
CXCL10
C-X-C motif chemokine ligand 10.
      
 0.574
ENSSARP00000011557
annotation not available
      
 0.568
ERBIN
Erbb2 interacting protein.
      
 0.565
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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