STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSSLanosterol synthase. (724 aa)    
Predicted Functional Partners:
CYP51A1
Cytochrome P450 family 51 subfamily A member 1.
 
 0.995
SQLE
Squalene epoxidase.
 
 
 0.979
SC5D
sterol-C5-desaturase.
   
 
 0.961
ENSSARP00000009293
annotation not available
 
  
 0.961
ENSSARP00000005231
annotation not available
  
 0.956
CYP7B1
Cytochrome P450 family 7 subfamily B member 1.
  
 0.956
CYP7A1
Cholesterol 7-alpha-monooxygenase.
  
 0.956
ENSSARP00000005521
annotation not available
    
 
 0.950
CH25H
Cholesterol 25-hydroxylase.
   
 
 0.928
MSMO1
Methylsterol monooxygenase 1.
   
 
 0.928
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.