Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HEATR3HEAT repeat containing 3. (545 aa)    
Predicted Functional Partners:
ENSSARP00000008544
annotation not available
      
 0.738
RPF2
Ribosome production factor 2 homolog.
   
 
 0.705
GTDC1
Glycosyltransferase like domain containing 1.
    
 
 0.667
TSR2
TSR2 ribosome maturation factor.
   
  
 0.647
C14orf119
Chromosome unknown open reading frame, human C14orf119.
   
  
 0.634
ZNF592
Zinc finger protein 592.
    
 
 0.623
CA7
Carbonic anhydrase 7.
      
 0.619
ENSSARP00000002517
annotation not available
 
 
  
 0.618
GRWD1
Glutamate rich WD repeat containing 1.
   
  
 0.612
FHIT
Fragile histidine triad diadenosine triphosphatase.
   
  
 0.611
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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