Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TOM1L2Target of myb1 like 2 membrane trafficking protein. (507 aa)    
Predicted Functional Partners:
ENSSARP00000011514
annotation not available
   
 
 0.973
MYO6
Myosin VI.
    
 
 0.967
ZFYVE16
Zinc finger FYVE-type containing 16.
    
 
 0.911
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.878
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.830
ENSSARP00000004100
annotation not available
    
   0.830
CLTCL1
Clathrin heavy chain like 1.
    
 
 0.819
CLTC
Clathrin heavy chain.
    
 
 0.819
URGCP
Upregulator of cell proliferation.
    
   0.797
CARD6
Caspase recruitment domain family member 6.
    
   0.797
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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