STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTBK2Tau tubulin kinase 2. (1217 aa)    
Predicted Functional Partners:
ENSSARP00000005796
annotation not available
    
 0.867
LTV1
LTV1 ribosome biogenesis factor.
    
 0.864
RIOK2
RIO kinase 2.
   
 0.862
TSR1
TSR1 ribosome maturation factor.
    
 0.857
CEP83
Centrosomal protein 83.
    
 0.847
ENSSARP00000004498
annotation not available
     
 0.809
ATXN7L2
Ataxin 7 like 2.
    
 
 0.780
ENSSARP00000006343
annotation not available
    
 0.779
IFT88
Intraflagellar transport 88.
    
 
 0.772
IFT140
Intraflagellar transport 140.
      
 0.761
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.