ENSSARP00000001290 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSARP00000001290

annotation not available (155 aa)

Predicted Functional Partners:

ENSSARP00000007429

0.947

SLC25A31

0.940

ENSSARP00000007992

0.935

VDAC2

0.935

UQCRC2

0.927

UQCRFS1

0.898

ENSSARP00000010964

0.898

ENSSARP00000003697

0.886

ENSSARP00000010896

0.886

UQCRC1

0.885

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001290	ENSSARP00000003697	ENSSARP00000001290	ENSSARP00000003697	annotation not available	annotation not available	0.886
ENSSARP00000001290	ENSSARP00000007429	ENSSARP00000001290	ENSSARP00000007429	annotation not available	annotation not available	0.947
ENSSARP00000001290	ENSSARP00000007992	ENSSARP00000001290	ENSSARP00000007992	annotation not available	annotation not available	0.935
ENSSARP00000001290	ENSSARP00000010896	ENSSARP00000001290	ENSSARP00000010896	annotation not available	annotation not available	0.886
ENSSARP00000001290	ENSSARP00000010964	ENSSARP00000001290	ENSSARP00000010964	annotation not available	annotation not available	0.898
ENSSARP00000001290	SLC25A31	ENSSARP00000001290	ENSSARP00000008218	annotation not available	Solute carrier family 25 member 31.	0.940
ENSSARP00000001290	UQCRC1	ENSSARP00000001290	ENSSARP00000003231	annotation not available	Ubiquinol-cytochrome c reductase core protein 1.	0.885
ENSSARP00000001290	UQCRC2	ENSSARP00000001290	ENSSARP00000009638	annotation not available	Ubiquinol-cytochrome c reductase core protein 2.	0.927
ENSSARP00000001290	UQCRFS1	ENSSARP00000001290	ENSSARP00000008439	annotation not available	Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.	0.898
ENSSARP00000001290	VDAC2	ENSSARP00000001290	ENSSARP00000010093	annotation not available	Voltage dependent anion channel 2.	0.935
ENSSARP00000003697	ENSSARP00000001290	ENSSARP00000003697	ENSSARP00000001290	annotation not available	annotation not available	0.886
ENSSARP00000003697	ENSSARP00000010964	ENSSARP00000003697	ENSSARP00000010964	annotation not available	annotation not available	0.580
ENSSARP00000003697	SLC25A31	ENSSARP00000003697	ENSSARP00000008218	annotation not available	Solute carrier family 25 member 31.	0.762
ENSSARP00000007429	ENSSARP00000001290	ENSSARP00000007429	ENSSARP00000001290	annotation not available	annotation not available	0.947
ENSSARP00000007429	ENSSARP00000007992	ENSSARP00000007429	ENSSARP00000007992	annotation not available	annotation not available	0.999
ENSSARP00000007429	ENSSARP00000010896	ENSSARP00000007429	ENSSARP00000010896	annotation not available	annotation not available	0.816
ENSSARP00000007429	ENSSARP00000010964	ENSSARP00000007429	ENSSARP00000010964	annotation not available	annotation not available	0.955
ENSSARP00000007429	SLC25A31	ENSSARP00000007429	ENSSARP00000008218	annotation not available	Solute carrier family 25 member 31.	0.967
ENSSARP00000007429	UQCRC1	ENSSARP00000007429	ENSSARP00000003231	annotation not available	Ubiquinol-cytochrome c reductase core protein 1.	0.606
ENSSARP00000007429	UQCRC2	ENSSARP00000007429	ENSSARP00000009638	annotation not available	Ubiquinol-cytochrome c reductase core protein 2.	0.774