Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC33Tetratricopeptide repeat domain 33. (235 aa)    
Predicted Functional Partners:
GET4
Guided entry of tail-anchored proteins factor 4.
   
 0.961
WDR61
WD repeat domain 61.
    
  0.954
PHF5A
PHD finger protein 5A.
    
   0.944
ENSSARP00000006623
annotation not available
    
   0.944
GET3
Guided entry of tail-anchored proteins factor 3, ATPase.
   
 0.936
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.930
SEC61B
SEC61 translocon beta subunit.
    
 0.921
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 0.910
ENSSARP00000000109
annotation not available
    
   0.909
ENSSARP00000010741
annotation not available
    
   0.896
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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