STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSTM1Osteoclastogenesis associated transmembrane protein 1. (336 aa)    
Predicted Functional Partners:
ENSSARP00000011649
annotation not available
    
 0.997
ENSSARP00000000973
annotation not available
      
 0.851
TMED6
Transmembrane p24 trafficking protein 6.
      
 0.833
CLCN5
Chloride voltage-gated channel 5.
    
 0.802
QPCTL
Glutaminyl-peptide cyclotransferase like.
   
  
 0.768
CLCN3
Chloride voltage-gated channel 3.
    
 0.753
COPZ2
Coatomer protein complex subunit zeta 2.
      
 0.726
ENSSARP00000011584
annotation not available
      
 0.688
ENSSARP00000006869
annotation not available
      
 0.685
GCDH
glutaryl-CoA dehydrogenase.
   
  
 0.683
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.