ENSSARP00000001313 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ENSSARP00000001313

annotation not available (1068 aa)

Predicted Functional Partners:

ENSSARP00000011410

0.998

NPPA

0.861

ENSSARP00000004879

0.839

ENSSARP00000009795

0.818

ENSSARP00000012927

0.796

PDE6C

0.759

PDE5A

0.724

PDZD3

0.708

ENSSARP00000001637

0.694

PRKG2

0.680

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001313	ENSSARP00000001637	ENSSARP00000001313	ENSSARP00000001637	annotation not available	annotation not available	0.694
ENSSARP00000001313	ENSSARP00000004879	ENSSARP00000001313	ENSSARP00000004879	annotation not available	annotation not available	0.839
ENSSARP00000001313	ENSSARP00000009795	ENSSARP00000001313	ENSSARP00000009795	annotation not available	annotation not available	0.818
ENSSARP00000001313	ENSSARP00000011410	ENSSARP00000001313	ENSSARP00000011410	annotation not available	annotation not available	0.998
ENSSARP00000001313	ENSSARP00000012927	ENSSARP00000001313	ENSSARP00000012927	annotation not available	annotation not available	0.796
ENSSARP00000001313	NPPA	ENSSARP00000001313	ENSSARP00000003726	annotation not available	Natriuretic peptide A.	0.861
ENSSARP00000001313	PDE5A	ENSSARP00000001313	ENSSARP00000012294	annotation not available	Phosphodiesterase 5A.	0.724
ENSSARP00000001313	PDE6C	ENSSARP00000001313	ENSSARP00000010536	annotation not available	Phosphodiesterase 6C.	0.759
ENSSARP00000001313	PDZD3	ENSSARP00000001313	ENSSARP00000001159	annotation not available	PDZ domain containing 3.	0.708
ENSSARP00000001313	PRKG2	ENSSARP00000001313	ENSSARP00000007380	annotation not available	Protein kinase cGMP-dependent 2.	0.680
ENSSARP00000001637	ENSSARP00000001313	ENSSARP00000001637	ENSSARP00000001313	annotation not available	annotation not available	0.694
ENSSARP00000004879	ENSSARP00000001313	ENSSARP00000004879	ENSSARP00000001313	annotation not available	annotation not available	0.839
ENSSARP00000004879	ENSSARP00000012927	ENSSARP00000004879	ENSSARP00000012927	annotation not available	annotation not available	0.614
ENSSARP00000004879	PDE5A	ENSSARP00000004879	ENSSARP00000012294	annotation not available	Phosphodiesterase 5A.	0.676
ENSSARP00000009795	ENSSARP00000001313	ENSSARP00000009795	ENSSARP00000001313	annotation not available	annotation not available	0.818
ENSSARP00000009795	ENSSARP00000012927	ENSSARP00000009795	ENSSARP00000012927	annotation not available	annotation not available	0.650
ENSSARP00000011410	ENSSARP00000001313	ENSSARP00000011410	ENSSARP00000001313	annotation not available	annotation not available	0.998
ENSSARP00000011410	PDZD3	ENSSARP00000011410	ENSSARP00000001159	annotation not available	PDZ domain containing 3.	0.607
ENSSARP00000011410	PRKG2	ENSSARP00000011410	ENSSARP00000007380	annotation not available	Protein kinase cGMP-dependent 2.	0.619
ENSSARP00000012927	ENSSARP00000001313	ENSSARP00000012927	ENSSARP00000001313	annotation not available	annotation not available	0.796