Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001316annotation not available (580 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.936
ENSSARP00000011316
annotation not available
    
 0.769
RBX1
Ring-box 1.
    
 0.748
BBS9
Bardet-Biedl syndrome 9.
    
 0.669
BBS4
Bardet-Biedl syndrome 4.
    
 0.664
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.635
TTC8
Tetratricopeptide repeat domain 8.
    
 0.632
CAND1
Cullin associated and neddylation dissociated 1.
     
 0.629
KDM6A
Lysine demethylase 6A.
    
 0.628
ENSSARP00000005619
annotation not available
    
  0.628
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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