STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MACROH2A1macroH2A.1 histone. (259 aa)    
Predicted Functional Partners:
ENSSARP00000008541
annotation not available
   
 
 0.975
ENSSARP00000006192
annotation not available
    
 
 0.955
HDAC9
Histone deacetylase 9.
   
 0.952
MYSM1
Myb like, SWIRM and MPN domains 1.
  
 0.948
MACROH2A2
macroH2A.2 histone.
   
  0.934
ATRX
ATRX chromatin remodeler.
   
 0.912
XRCC6
X-ray repair cross complementing 6.
    
 0.904
GLYR1
Glyoxylate reductase 1 homolog.
   
   0.887
CBX1
Chromobox 1.
    
 0.880
TRIM24
Tripartite motif containing 24.
    
  0.875
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.