STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MACROH2A1macroH2A.1 histone. (259 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
  
 0.990
ENSSARP00000003871
annotation not available
   
 0.922
HDAC6
Histone deacetylase 6.
   
 0.919
HDAC9
Histone deacetylase 9.
   
 0.919
ENSSARP00000008041
annotation not available
   
 0.919
HDAC2
Histone deacetylase 2.
   
 0.907
HDAC1
Histone deacetylase 1.
   
 0.907
KDM6A
Lysine demethylase 6A.
   
 0.905
KDM6B
Lysine demethylase 6B.
   
 0.903
GLYR1
Glyoxylate reductase 1 homolog.
    
 
 0.899
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.