Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC15A5Solute carrier family 15 member 5. (450 aa)    
Predicted Functional Partners:
SLC13A5
Solute carrier family 13 member 5.
      
 0.737
CXorf21
Chromosome unknown open reading frame, human CXorf21.
    
 0.703
ENSSARP00000003488
annotation not available
    
   0.632
NUDT12
Nudix hydrolase 12.
   
  0.560
ENSSARP00000005312
annotation not available
      
 0.552
ENSSARP00000008391
annotation not available
      
 0.550
NUDT13
Nudix hydrolase 13.
     
  0.523
ANKRD55
Ankyrin repeat domain 55.
   
 
 0.513
ENSSARP00000011274
annotation not available
    
   0.477
ENSSARP00000004091
annotation not available
      
 0.451
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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