STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYDE2Synapse defective Rho GTPase homolog 2. (1065 aa)    
Predicted Functional Partners:
ELP4
Elongator acetyltransferase complex subunit 4.
      
 0.766
ENSSARP00000000125
annotation not available
    
 0.755
MYO9A
Myosin IXA.
    
0.755
RASL11B
RAS like family 11 member B.
    
 0.712
ENSSARP00000007708
annotation not available
    
 0.695
RAC1
Rac family small GTPase 1.
    
 0.670
ENSSARP00000004208
annotation not available
      
 0.666
RHOU
Ras homolog family member U.
    
 0.638
ENSSARP00000004682
annotation not available
    
 0.638
RHOV
Ras homolog family member V.
    
 0.638
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.