Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001332annotation not available (1010 aa)    
Predicted Functional Partners:
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
    
 0.771
COL3A1
Collagen type III alpha 1 chain.
   
 0.625
COL5A2
Collagen type V alpha 2 chain.
   
 0.615
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
     
  0.586
MSTN
Myostatin.
    
 
 0.580
ENSSARP00000002232
annotation not available
    
 0.574
TTC14
Tetratricopeptide repeat domain 14.
      
 0.574
SPCS3
Signal peptidase complex subunit 3.
     
  0.556
ENSSARP00000003197
annotation not available
      
 0.548
ENSSARP00000007747
annotation not available
     
 0.534
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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