Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A1BGalpha-1-B glycoprotein. (452 aa)    
Predicted Functional Partners:
HPX
Hemopexin.
   
 
 0.954
ENSSARP00000012444
annotation not available
   
 
 0.855
PZP
PZP alpha-2-macroglobulin like.
   
 
 0.738
C1S
Complement C1s.
   
 0.729
AHSG
Alpha 2-HS glycoprotein.
   
 0.712
FGA
Fibrinogen alpha chain.
   
 
 0.706
ENSSARP00000000868
annotation not available
   
 
 0.688
HRG
Histidine rich glycoprotein.
   
 0.677
GC
GC vitamin D binding protein.
   
  
 0.663
C5
Complement C5.
   
 
 0.652
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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