STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX22Sorting nexin 22. (181 aa)    
Predicted Functional Partners:
CYB561D1
Cytochrome b561 domain-containing protein 1.
      
 0.658
ZNF24
Zinc finger protein 24.
      
 0.616
ENSSARP00000004722
annotation not available
      
 0.586
SNX24
Sorting nexin 24.
    
  
0.542
STX8
Syntaxin 8.
    
 0.499
PALM2AKAP2
PALM2 and AKAP2 fusion.
      
 0.497
ENSSARP00000006226
annotation not available
      
 0.493
EFNA4
Ephrin A4.
      
 0.482
CDKL5
Cyclin dependent kinase like 5.
      
 0.477
KMO
Kynurenine 3-monooxygenase.
      
 0.463
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.