Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HSCBHscB mitochondrial iron-sulfur cluster cochaperone. (199 aa)    
Predicted Functional Partners:
ISCU
Iron-sulfur cluster assembly enzyme.
 
 
 0.986
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
    
 
 0.946
GLRX5
Glutaredoxin 5.
    
 0.918
ENSSARP00000004076
annotation not available
    
 
 0.875
SDHAF1
Succinate dehydrogenase complex assembly factor 1.
    
 
 0.875
LYRM7
LYR motif containing 7.
    
 0.862
ABCB7
ATP binding cassette subfamily B member 7.
    
 
 0.837
NFS1
NFS1 cysteine desulfurase.
  
 
 0.835
PDHX
Pyruvate dehydrogenase complex component X.
   
   0.827
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
    
   0.825
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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