Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KPNB1Karyopherin subunit beta 1. (875 aa)    
Predicted Functional Partners:
KPNA1
Karyopherin subunit alpha 1.
   
 0.999
KPNA3
Karyopherin subunit alpha 3.
   
 0.998
KPNA4
Karyopherin subunit alpha 4.
   
 0.998
ENSSARP00000003637
annotation not available
   
 0.995
KPNA5
Karyopherin subunit alpha 5.
   
 0.995
SNUPN
Snurportin 1.
    
 0.994
KPNA6
Karyopherin subunit alpha 6.
   
 0.993
IPO5
Importin 5.
   
 
 0.992
KPNA7
Karyopherin subunit alpha 7.
   
 0.992
RANBP1
RAN binding protein 1.
   
 0.992
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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