Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PARD6GPar-6 family cell polarity regulator gamma. (347 aa)    
Predicted Functional Partners:
PARD3
Par-3 family cell polarity regulator.
   
 0.998
ENSSARP00000004682
annotation not available
    
 0.990
ENSSARP00000004113
annotation not available
    
 0.985
MPP5
Membrane palmitoylated protein 5.
   
0.984
PARD6A
Par-6 family cell polarity regulator alpha.
  
 
0.981
RAC1
Rac family small GTPase 1.
    
 0.977
PARD3B
Par-3 family cell polarity regulator beta.
   
 0.960
LLGL1
LLGL scribble cell polarity complex component 1.
    
 
 0.955
RHOJ
Ras homolog family member J.
    
 0.954
ENSSARP00000004441
annotation not available
    
 0.954
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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