KRT16 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

KRT16

Keratin 16. (300 aa)

Predicted Functional Partners:

KRT8

0.914

UNC79

0.725

ENSSARP00000007047

0.703

TEP1

0.703

KDM6A

0.663

KDM6B

0.663

ARID4A

0.653

ARID4B

0.653

ENSSARP00000006122

0.642

RANBP2

0.624

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ARID4B	ENSSARP00000006346	ENSSARP00000010804	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.870
ARID4A	ENSSARP00000007047	ENSSARP00000006346	ENSSARP00000007047	AT-rich interaction domain 4A.	annotation not available	0.485
ARID4A	KDM6A	ENSSARP00000006346	ENSSARP00000003229	AT-rich interaction domain 4A.	Lysine demethylase 6A.	0.936
ARID4A	KDM6B	ENSSARP00000006346	ENSSARP00000005661	AT-rich interaction domain 4A.	Lysine demethylase 6B.	0.936
ARID4A	KRT16	ENSSARP00000006346	ENSSARP00000001372	AT-rich interaction domain 4A.	Keratin 16.	0.653
ARID4A	TEP1	ENSSARP00000006346	ENSSARP00000013104	AT-rich interaction domain 4A.	Telomerase associated protein 1.	0.485
ARID4B	ARID4A	ENSSARP00000010804	ENSSARP00000006346	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.870
ARID4B	ENSSARP00000007047	ENSSARP00000010804	ENSSARP00000007047	AT-rich interaction domain 4B.	annotation not available	0.485
ARID4B	KDM6A	ENSSARP00000010804	ENSSARP00000003229	AT-rich interaction domain 4B.	Lysine demethylase 6A.	0.945
ARID4B	KDM6B	ENSSARP00000010804	ENSSARP00000005661	AT-rich interaction domain 4B.	Lysine demethylase 6B.	0.941
ARID4B	KRT16	ENSSARP00000010804	ENSSARP00000001372	AT-rich interaction domain 4B.	Keratin 16.	0.653
ARID4B	RANBP2	ENSSARP00000010804	ENSSARP00000005110	AT-rich interaction domain 4B.	RAN binding protein 2.	0.413
ARID4B	TEP1	ENSSARP00000010804	ENSSARP00000013104	AT-rich interaction domain 4B.	Telomerase associated protein 1.	0.485
ENSSARP00000006122	KRT16	ENSSARP00000006122	ENSSARP00000001372	annotation not available	Keratin 16.	0.642
ENSSARP00000007047	ARID4A	ENSSARP00000007047	ENSSARP00000006346	annotation not available	AT-rich interaction domain 4A.	0.485
ENSSARP00000007047	ARID4B	ENSSARP00000007047	ENSSARP00000010804	annotation not available	AT-rich interaction domain 4B.	0.485
ENSSARP00000007047	KDM6A	ENSSARP00000007047	ENSSARP00000003229	annotation not available	Lysine demethylase 6A.	0.821
ENSSARP00000007047	KDM6B	ENSSARP00000007047	ENSSARP00000005661	annotation not available	Lysine demethylase 6B.	0.821
ENSSARP00000007047	KRT16	ENSSARP00000007047	ENSSARP00000001372	annotation not available	Keratin 16.	0.703
ENSSARP00000007047	RANBP2	ENSSARP00000007047	ENSSARP00000005110	annotation not available	RAN binding protein 2.	0.760