ENSSARP00000001374 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSSARP00000001374

annotation not available (133 aa)

Predicted Functional Partners:

JCHAIN

0.586

ENSSARP00000007959

0.516

ENSSARP00000001038

0.513

ENSSARP00000012325

0.496

ENSSARP00000008071

0.441

ENSSARP00000001428

0.401

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001038	ENSSARP00000001374	ENSSARP00000001038	ENSSARP00000001374	annotation not available	annotation not available	0.513
ENSSARP00000001038	ENSSARP00000001428	ENSSARP00000001038	ENSSARP00000001428	annotation not available	annotation not available	0.613
ENSSARP00000001038	ENSSARP00000007959	ENSSARP00000001038	ENSSARP00000007959	annotation not available	annotation not available	0.999
ENSSARP00000001038	ENSSARP00000008071	ENSSARP00000001038	ENSSARP00000008071	annotation not available	annotation not available	0.566
ENSSARP00000001038	ENSSARP00000012325	ENSSARP00000001038	ENSSARP00000012325	annotation not available	annotation not available	0.921
ENSSARP00000001038	JCHAIN	ENSSARP00000001038	ENSSARP00000007260	annotation not available	Joining chain of multimeric IgA and IgM.	0.962
ENSSARP00000001374	ENSSARP00000001038	ENSSARP00000001374	ENSSARP00000001038	annotation not available	annotation not available	0.513
ENSSARP00000001374	ENSSARP00000001428	ENSSARP00000001374	ENSSARP00000001428	annotation not available	annotation not available	0.401
ENSSARP00000001374	ENSSARP00000007959	ENSSARP00000001374	ENSSARP00000007959	annotation not available	annotation not available	0.516
ENSSARP00000001374	ENSSARP00000008071	ENSSARP00000001374	ENSSARP00000008071	annotation not available	annotation not available	0.441
ENSSARP00000001374	ENSSARP00000012325	ENSSARP00000001374	ENSSARP00000012325	annotation not available	annotation not available	0.496
ENSSARP00000001374	JCHAIN	ENSSARP00000001374	ENSSARP00000007260	annotation not available	Joining chain of multimeric IgA and IgM.	0.586
ENSSARP00000001428	ENSSARP00000001038	ENSSARP00000001428	ENSSARP00000001038	annotation not available	annotation not available	0.613
ENSSARP00000001428	ENSSARP00000001374	ENSSARP00000001428	ENSSARP00000001374	annotation not available	annotation not available	0.401
ENSSARP00000001428	ENSSARP00000007959	ENSSARP00000001428	ENSSARP00000007959	annotation not available	annotation not available	0.568
ENSSARP00000001428	ENSSARP00000008071	ENSSARP00000001428	ENSSARP00000008071	annotation not available	annotation not available	0.918
ENSSARP00000007959	ENSSARP00000001038	ENSSARP00000007959	ENSSARP00000001038	annotation not available	annotation not available	0.999
ENSSARP00000007959	ENSSARP00000001374	ENSSARP00000007959	ENSSARP00000001374	annotation not available	annotation not available	0.516
ENSSARP00000007959	ENSSARP00000001428	ENSSARP00000007959	ENSSARP00000001428	annotation not available	annotation not available	0.568
ENSSARP00000007959	ENSSARP00000008071	ENSSARP00000007959	ENSSARP00000008071	annotation not available	annotation not available	0.582