Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001376annotation not available (286 aa)    
Predicted Functional Partners:
ENSSARP00000003065
annotation not available
   
 
 0.989
EFHC1
EF-hand domain containing 1.
   
 
 0.972
ENSSARP00000010438
annotation not available
   
 0.972
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.970
EFHC2
EF-hand domain containing 2.
   
 
 0.969
ENSSARP00000009517
annotation not available
   
 0.959
ENSSARP00000002423
annotation not available
   
 
 0.950
RSPH14
Radial spoke head 14 homolog.
   
 
 0.949
ENSSARP00000005991
annotation not available
   
 
 0.949
ENSSARP00000004167
annotation not available
   
 
 0.947
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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