STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPAR6Lysophosphatidic acid receptor 6. (345 aa)    
Predicted Functional Partners:
LPAR2
Lysophosphatidic acid receptor 2.
     
 0.915
ENSSARP00000000713
annotation not available
     
 0.910
LPAR1
Lysophosphatidic acid receptor 1.
     
 0.910
GNA12
G protein subunit alpha 12.
    
 0.895
GNA13
G protein subunit alpha 13.
    
 0.891
ENSSARP00000003248
annotation not available
    
 0.889
GNAQ
G protein subunit alpha q.
    
 0.883
CHRM1
Cholinergic receptor muscarinic 1.
    
0.846
ENSSARP00000005350
annotation not available
    
  0.839
AGT
Angiotensinogen.
    
  0.839
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.