Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DACH2Dachshund family transcription factor 2. (594 aa)    
Predicted Functional Partners:
DACH1
Dachshund family transcription factor 1.
   
   0.961
EYA3
EYA transcriptional coactivator and phosphatase 3.
    
 
 0.799
EYA1
EYA transcriptional coactivator and phosphatase 1.
    
 
 0.799
EYA4
EYA transcriptional coactivator and phosphatase 4.
    
 
 0.799
C1GALT1C1
C1GALT1-specific chaperone 1-like.
      
 0.566
MED15
Mediator complex subunit 15.
      
 0.537
DNAJC3
DnaJ heat shock protein family (Hsp40) member C3.
    
   0.537
SIX6
SIX homeobox 6.
    
 
 0.530
SMAD4
SMAD family member 4.
    
 
 0.508
MYOG
Myogenin.
    
 
 0.499
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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