ENSSARP00000001403 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSARP00000001403

annotation not available (368 aa)

Predicted Functional Partners:

ENSSARP00000000890

0.761

ENSSARP00000011258

0.758

TYSND1

0.755

ENSSARP00000007724

0.752

AIFM1

0.734

ENSSARP00000003940

0.734

AIFM2

0.734

PEX5L

0.728

ENSSARP00000003886

0.726

DMGDH

0.726

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIFM1	AIFM2	ENSSARP00000003252	ENSSARP00000007698	Apoptosis inducing factor mitochondria associated 1.	Apoptosis inducing factor mitochondria associated 2.	0.558
AIFM1	DMGDH	ENSSARP00000003252	ENSSARP00000009386	Apoptosis inducing factor mitochondria associated 1.	Dimethylglycine dehydrogenase.	0.572
AIFM1	ENSSARP00000000890	ENSSARP00000003252	ENSSARP00000000890	Apoptosis inducing factor mitochondria associated 1.	annotation not available	0.419
AIFM1	ENSSARP00000001403	ENSSARP00000003252	ENSSARP00000001403	Apoptosis inducing factor mitochondria associated 1.	annotation not available	0.734
AIFM1	ENSSARP00000003886	ENSSARP00000003252	ENSSARP00000003886	Apoptosis inducing factor mitochondria associated 1.	annotation not available	0.572
AIFM1	ENSSARP00000007724	ENSSARP00000003252	ENSSARP00000007724	Apoptosis inducing factor mitochondria associated 1.	annotation not available	0.572
AIFM2	AIFM1	ENSSARP00000007698	ENSSARP00000003252	Apoptosis inducing factor mitochondria associated 2.	Apoptosis inducing factor mitochondria associated 1.	0.558
AIFM2	DMGDH	ENSSARP00000007698	ENSSARP00000009386	Apoptosis inducing factor mitochondria associated 2.	Dimethylglycine dehydrogenase.	0.572
AIFM2	ENSSARP00000000890	ENSSARP00000007698	ENSSARP00000000890	Apoptosis inducing factor mitochondria associated 2.	annotation not available	0.577
AIFM2	ENSSARP00000001403	ENSSARP00000007698	ENSSARP00000001403	Apoptosis inducing factor mitochondria associated 2.	annotation not available	0.734
AIFM2	ENSSARP00000003886	ENSSARP00000007698	ENSSARP00000003886	Apoptosis inducing factor mitochondria associated 2.	annotation not available	0.572
AIFM2	ENSSARP00000007724	ENSSARP00000007698	ENSSARP00000007724	Apoptosis inducing factor mitochondria associated 2.	annotation not available	0.572
AIFM2	TYSND1	ENSSARP00000007698	ENSSARP00000000865	Apoptosis inducing factor mitochondria associated 2.	Trypsin domain containing 1.	0.458
DMGDH	AIFM1	ENSSARP00000009386	ENSSARP00000003252	Dimethylglycine dehydrogenase.	Apoptosis inducing factor mitochondria associated 1.	0.572
DMGDH	AIFM2	ENSSARP00000009386	ENSSARP00000007698	Dimethylglycine dehydrogenase.	Apoptosis inducing factor mitochondria associated 2.	0.572
DMGDH	ENSSARP00000001403	ENSSARP00000009386	ENSSARP00000001403	Dimethylglycine dehydrogenase.	annotation not available	0.726
DMGDH	ENSSARP00000003940	ENSSARP00000009386	ENSSARP00000003940	Dimethylglycine dehydrogenase.	annotation not available	0.572
DMGDH	ENSSARP00000011258	ENSSARP00000009386	ENSSARP00000011258	Dimethylglycine dehydrogenase.	annotation not available	0.655
ENSSARP00000000890	AIFM1	ENSSARP00000000890	ENSSARP00000003252	annotation not available	Apoptosis inducing factor mitochondria associated 1.	0.419
ENSSARP00000000890	AIFM2	ENSSARP00000000890	ENSSARP00000007698	annotation not available	Apoptosis inducing factor mitochondria associated 2.	0.577