ENSSARP00000001404 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSARP00000001404

annotation not available (711 aa)

Predicted Functional Partners:

ENSSARP00000010405

0.932

ENSSARP00000005281

0.927

MYO1A

0.927

RAC1

0.927

ENSSARP00000000980

0.926

MYO6

0.926

NCKAP1

0.924

PDLIM4

0.924

MYO3A

0.923

PDLIM1

0.921

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000000980	ENSSARP00000001404	ENSSARP00000000980	ENSSARP00000001404	annotation not available	annotation not available	0.926
ENSSARP00000000980	ENSSARP00000005281	ENSSARP00000000980	ENSSARP00000005281	annotation not available	annotation not available	0.920
ENSSARP00000000980	ENSSARP00000010405	ENSSARP00000000980	ENSSARP00000010405	annotation not available	annotation not available	0.923
ENSSARP00000000980	MYO1A	ENSSARP00000000980	ENSSARP00000012550	annotation not available	Myosin IA.	0.921
ENSSARP00000000980	MYO3A	ENSSARP00000000980	ENSSARP00000004603	annotation not available	Myosin IIIA.	0.924
ENSSARP00000000980	MYO6	ENSSARP00000000980	ENSSARP00000009744	annotation not available	Myosin VI.	0.926
ENSSARP00000000980	NCKAP1	ENSSARP00000000980	ENSSARP00000003756	annotation not available	NCK associated protein 1.	0.923
ENSSARP00000000980	PDLIM1	ENSSARP00000000980	ENSSARP00000001854	annotation not available	PDZ and LIM domain 1.	0.930
ENSSARP00000000980	PDLIM4	ENSSARP00000000980	ENSSARP00000005614	annotation not available	PDZ and LIM domain 4.	0.929
ENSSARP00000000980	RAC1	ENSSARP00000000980	ENSSARP00000013174	annotation not available	Rac family small GTPase 1.	0.927
ENSSARP00000001404	ENSSARP00000000980	ENSSARP00000001404	ENSSARP00000000980	annotation not available	annotation not available	0.926
ENSSARP00000001404	ENSSARP00000005281	ENSSARP00000001404	ENSSARP00000005281	annotation not available	annotation not available	0.927
ENSSARP00000001404	ENSSARP00000010405	ENSSARP00000001404	ENSSARP00000010405	annotation not available	annotation not available	0.932
ENSSARP00000001404	MYO1A	ENSSARP00000001404	ENSSARP00000012550	annotation not available	Myosin IA.	0.927
ENSSARP00000001404	MYO3A	ENSSARP00000001404	ENSSARP00000004603	annotation not available	Myosin IIIA.	0.923
ENSSARP00000001404	MYO6	ENSSARP00000001404	ENSSARP00000009744	annotation not available	Myosin VI.	0.926
ENSSARP00000001404	NCKAP1	ENSSARP00000001404	ENSSARP00000003756	annotation not available	NCK associated protein 1.	0.924
ENSSARP00000001404	PDLIM1	ENSSARP00000001404	ENSSARP00000001854	annotation not available	PDZ and LIM domain 1.	0.921
ENSSARP00000001404	PDLIM4	ENSSARP00000001404	ENSSARP00000005614	annotation not available	PDZ and LIM domain 4.	0.924
ENSSARP00000001404	RAC1	ENSSARP00000001404	ENSSARP00000013174	annotation not available	Rac family small GTPase 1.	0.927