Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A5Solute carrier family 27 member 5. (690 aa)    
Predicted Functional Partners:
SCP2
Sterol carrier protein 2.
   
 
 0.970
AMACR
alpha-methylacyl-CoA racemase.
   
 
 0.947
BBS9
Bardet-Biedl syndrome 9.
   
 0.856
BBS7
Bardet-Biedl syndrome 7.
    
 0.854
BBS4
Bardet-Biedl syndrome 4.
    
 0.836
TTC8
Tetratricopeptide repeat domain 8.
    
 0.826
KIFC2
Kinesin family member C2.
    
 0.780
ENSSARP00000009278
annotation not available
    
 0.780
AGPAT1
1-acylglycerol-3-phosphate O-acyltransferase 1.
    
 
 0.707
KDM6A
Lysine demethylase 6A.
    
 0.703
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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