Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001406annotation not available (311 aa)    
Predicted Functional Partners:
ENSSARP00000003058
annotation not available
    
 0.999
NUP155
Nucleoporin 155.
   
 0.997
NDC1
NDC1 transmembrane nucleoporin.
   
 0.997
NUP85
Nucleoporin 85.
   
 0.996
NUP153
Nucleoporin 153.
    
 0.996
NUP54
Nucleoporin 54.
   
 0.995
NUP98
Nucleoporin 98.
   
 0.995
NUP188
Nucleoporin 188.
    
 0.995
NUP43
Nucleoporin 43.
   
 0.994
NUP88
Nucleoporin 88.
   
 0.994
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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