ENSSARP00000001424 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSSARP00000001424

annotation not available (715 aa)

Predicted Functional Partners:

ENSSARP00000003538

0.801

ENSSARP00000011302

0.714

ENSSARP00000012621

0.714

PRR15L

0.683

OSBPL6

0.631

ENSSARP00000007440

0.589

DNAJC6

0.585

ENSSARP00000008712

0.567

NFE2L1

0.557

ENSSARP00000001360

0.551

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNAJC6	ENSSARP00000001424	ENSSARP00000004437	ENSSARP00000001424	DnaJ heat shock protein family (Hsp40) member C6.	annotation not available	0.585
DNAJC6	ENSSARP00000003538	ENSSARP00000004437	ENSSARP00000003538	DnaJ heat shock protein family (Hsp40) member C6.	annotation not available	0.991
DNAJC6	OSBPL6	ENSSARP00000004437	ENSSARP00000007841	DnaJ heat shock protein family (Hsp40) member C6.	Oxysterol binding protein like 6.	0.585
ENSSARP00000001360	ENSSARP00000001424	ENSSARP00000001360	ENSSARP00000001424	annotation not available	annotation not available	0.551
ENSSARP00000001360	NFE2L1	ENSSARP00000001360	ENSSARP00000002509	annotation not available	Nuclear factor, erythroid 2 like 1.	0.585
ENSSARP00000001360	OSBPL6	ENSSARP00000001360	ENSSARP00000007841	annotation not available	Oxysterol binding protein like 6.	0.760
ENSSARP00000001424	DNAJC6	ENSSARP00000001424	ENSSARP00000004437	annotation not available	DnaJ heat shock protein family (Hsp40) member C6.	0.585
ENSSARP00000001424	ENSSARP00000001360	ENSSARP00000001424	ENSSARP00000001360	annotation not available	annotation not available	0.551
ENSSARP00000001424	ENSSARP00000003538	ENSSARP00000001424	ENSSARP00000003538	annotation not available	annotation not available	0.801
ENSSARP00000001424	ENSSARP00000007440	ENSSARP00000001424	ENSSARP00000007440	annotation not available	annotation not available	0.589
ENSSARP00000001424	ENSSARP00000008712	ENSSARP00000001424	ENSSARP00000008712	annotation not available	annotation not available	0.567
ENSSARP00000001424	ENSSARP00000011302	ENSSARP00000001424	ENSSARP00000011302	annotation not available	annotation not available	0.714
ENSSARP00000001424	ENSSARP00000012621	ENSSARP00000001424	ENSSARP00000012621	annotation not available	annotation not available	0.714
ENSSARP00000001424	NFE2L1	ENSSARP00000001424	ENSSARP00000002509	annotation not available	Nuclear factor, erythroid 2 like 1.	0.557
ENSSARP00000001424	OSBPL6	ENSSARP00000001424	ENSSARP00000007841	annotation not available	Oxysterol binding protein like 6.	0.631
ENSSARP00000001424	PRR15L	ENSSARP00000001424	ENSSARP00000007444	annotation not available	Proline rich 15 like.	0.683
ENSSARP00000003538	DNAJC6	ENSSARP00000003538	ENSSARP00000004437	annotation not available	DnaJ heat shock protein family (Hsp40) member C6.	0.991
ENSSARP00000003538	ENSSARP00000001424	ENSSARP00000003538	ENSSARP00000001424	annotation not available	annotation not available	0.801
ENSSARP00000003538	OSBPL6	ENSSARP00000003538	ENSSARP00000007841	annotation not available	Oxysterol binding protein like 6.	0.801
ENSSARP00000007440	ENSSARP00000001424	ENSSARP00000007440	ENSSARP00000001424	annotation not available	annotation not available	0.589