KLHL7 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Coexpression

Experiments

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[Homology]

Score

KLHL7

Kelch like family member 7. (586 aa)

Predicted Functional Partners:

CUL3

0.970

ENSSARP00000007950

0.826

ENSSARP00000009886

0.728

SDC2

0.715

ZNF84

0.714

TTC8

0.673

RLF

0.665

FAM49B

0.658

CERKL

0.643

UBXN7

0.622

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CERKL	KLHL7	ENSSARP00000004239	ENSSARP00000001425	Ceramide kinase like.	Kelch like family member 7.	0.643
CERKL	TTC8	ENSSARP00000004239	ENSSARP00000001862	Ceramide kinase like.	Tetratricopeptide repeat domain 8.	0.464
CUL3	ENSSARP00000007950	ENSSARP00000009049	ENSSARP00000007950	Cullin 3.	annotation not available	0.915
CUL3	ENSSARP00000009886	ENSSARP00000009049	ENSSARP00000009886	Cullin 3.	annotation not available	0.967
CUL3	KLHL7	ENSSARP00000009049	ENSSARP00000001425	Cullin 3.	Kelch like family member 7.	0.970
CUL3	UBXN7	ENSSARP00000009049	ENSSARP00000008094	Cullin 3.	UBX domain protein 7.	0.995
ENSSARP00000007950	CUL3	ENSSARP00000007950	ENSSARP00000009049	annotation not available	Cullin 3.	0.915
ENSSARP00000007950	KLHL7	ENSSARP00000007950	ENSSARP00000001425	annotation not available	Kelch like family member 7.	0.826
ENSSARP00000007950	RLF	ENSSARP00000007950	ENSSARP00000000157	annotation not available	Rearranged L-myc fusion.	0.542
ENSSARP00000009886	CUL3	ENSSARP00000009886	ENSSARP00000009049	annotation not available	Cullin 3.	0.967
ENSSARP00000009886	KLHL7	ENSSARP00000009886	ENSSARP00000001425	annotation not available	Kelch like family member 7.	0.728
ENSSARP00000009886	TTC8	ENSSARP00000009886	ENSSARP00000001862	annotation not available	Tetratricopeptide repeat domain 8.	0.632
ENSSARP00000009886	UBXN7	ENSSARP00000009886	ENSSARP00000008094	annotation not available	UBX domain protein 7.	0.607
FAM49B	KLHL7	ENSSARP00000000363	ENSSARP00000001425	Family with sequence similarity 49 member B.	Kelch like family member 7.	0.658
KLHL7	CERKL	ENSSARP00000001425	ENSSARP00000004239	Kelch like family member 7.	Ceramide kinase like.	0.643
KLHL7	CUL3	ENSSARP00000001425	ENSSARP00000009049	Kelch like family member 7.	Cullin 3.	0.970
KLHL7	ENSSARP00000007950	ENSSARP00000001425	ENSSARP00000007950	Kelch like family member 7.	annotation not available	0.826
KLHL7	ENSSARP00000009886	ENSSARP00000001425	ENSSARP00000009886	Kelch like family member 7.	annotation not available	0.728
KLHL7	FAM49B	ENSSARP00000001425	ENSSARP00000000363	Kelch like family member 7.	Family with sequence similarity 49 member B.	0.658
KLHL7	RLF	ENSSARP00000001425	ENSSARP00000000157	Kelch like family member 7.	Rearranged L-myc fusion.	0.665