STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS25Vacuolar protein sorting 25 homolog. (114 aa)    
Predicted Functional Partners:
SNF8
SNF8 subunit of ESCRT-II.
   
 0.999
ENSSARP00000005039
annotation not available
   
 0.999
ENSSARP00000012128
annotation not available
   
 0.999
TSG101
Tumor susceptibility 101.
   
 0.997
VPS37A
VPS37A subunit of ESCRT-I.
    
 0.997
CHMP2A
Charged multivesicular body protein 2A.
   
 0.995
UBAP1
Ubiquitin associated protein 1.
    
 0.994
CHMP4C
Charged multivesicular body protein 4C.
    
 0.992
CHMP4B
Charged multivesicular body protein 4B.
    
 0.992
MVB12A
Multivesicular body subunit 12A.
    
 0.990
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.