ENSSARP00000001429 protein (Sorex araneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSARP00000001429

annotation not available (229 aa)

Predicted Functional Partners:

RB1CC1

0.596

ENSSARP00000008193

0.588

MINDY3

0.582

ENSSARP00000010547

0.572

ENSSARP00000004213

0.496

SEC61G

0.489

PRRG1

0.454

C7orf25

0.451

ENSSARP00000003261

0.449

EPS8

0.442

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C7orf25	ENSSARP00000001429	ENSSARP00000003902	ENSSARP00000001429	Chromosome 7 open reading frame 25.	annotation not available	0.451
C7orf25	SEC61G	ENSSARP00000003902	ENSSARP00000008946	Chromosome 7 open reading frame 25.	SEC61 translocon gamma subunit.	0.655
ENSSARP00000001429	C7orf25	ENSSARP00000001429	ENSSARP00000003902	annotation not available	Chromosome 7 open reading frame 25.	0.451
ENSSARP00000001429	ENSSARP00000003261	ENSSARP00000001429	ENSSARP00000003261	annotation not available	annotation not available	0.449
ENSSARP00000001429	ENSSARP00000004213	ENSSARP00000001429	ENSSARP00000004213	annotation not available	annotation not available	0.496
ENSSARP00000001429	ENSSARP00000008193	ENSSARP00000001429	ENSSARP00000008193	annotation not available	annotation not available	0.588
ENSSARP00000001429	ENSSARP00000010547	ENSSARP00000001429	ENSSARP00000010547	annotation not available	annotation not available	0.572
ENSSARP00000001429	EPS8	ENSSARP00000001429	ENSSARP00000011347	annotation not available	Epidermal growth factor receptor pathway substrate 8.	0.442
ENSSARP00000001429	MINDY3	ENSSARP00000001429	ENSSARP00000005199	annotation not available	MINDY lysine 48 deubiquitinase 3.	0.582
ENSSARP00000001429	PRRG1	ENSSARP00000001429	ENSSARP00000002192	annotation not available	Proline rich and Gla domain 1.	0.454
ENSSARP00000001429	RB1CC1	ENSSARP00000001429	ENSSARP00000007017	annotation not available	RB1 inducible coiled-coil 1.	0.596
ENSSARP00000001429	SEC61G	ENSSARP00000001429	ENSSARP00000008946	annotation not available	SEC61 translocon gamma subunit.	0.489
ENSSARP00000003261	ENSSARP00000001429	ENSSARP00000003261	ENSSARP00000001429	annotation not available	annotation not available	0.449
ENSSARP00000003261	ENSSARP00000008193	ENSSARP00000003261	ENSSARP00000008193	annotation not available	annotation not available	0.948
ENSSARP00000004213	ENSSARP00000001429	ENSSARP00000004213	ENSSARP00000001429	annotation not available	annotation not available	0.496
ENSSARP00000004213	EPS8	ENSSARP00000004213	ENSSARP00000011347	annotation not available	Epidermal growth factor receptor pathway substrate 8.	0.450
ENSSARP00000008193	ENSSARP00000001429	ENSSARP00000008193	ENSSARP00000001429	annotation not available	annotation not available	0.588
ENSSARP00000008193	ENSSARP00000003261	ENSSARP00000008193	ENSSARP00000003261	annotation not available	annotation not available	0.948
ENSSARP00000010547	ENSSARP00000001429	ENSSARP00000010547	ENSSARP00000001429	annotation not available	annotation not available	0.572
EPS8	ENSSARP00000001429	ENSSARP00000011347	ENSSARP00000001429	Epidermal growth factor receptor pathway substrate 8.	annotation not available	0.442