STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBQLN3Ubiquilin 3. (651 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
    
 0.983
ENSSARP00000007617
annotation not available
   
 0.981
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.967
NBR1
NBR1 autophagy cargo receptor.
   
 0.963
ITSN2
Intersectin 2.
    
 0.939
ENSSARP00000008544
annotation not available
   
 0.933
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.918
ENSSARP00000001071
annotation not available
   
 0.916
KDM2A
Lysine demethylase 2A.
    
 0.909
ENSSARP00000007374
annotation not available
    
 0.909
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.