Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCRN2Secernin 2. (425 aa)    
Predicted Functional Partners:
ARPC3
Actin related protein 2/3 complex subunit 3.
   
 0.952
ARPC5L
Actin related protein 2/3 complex subunit 5 like.
   
 0.904
ENSSARP00000006809
annotation not available
   
 0.816
ARPC1B
Actin related protein 2/3 complex subunit 1B.
   
 0.816
CAPZB
Capping actin protein of muscle Z-line subunit beta.
   
 
 0.747
WIPF2
WAS/WASL interacting protein family member 2.
    
 0.724
WAS
WASP actin nucleation promoting factor.
    
 0.703
WASL
WASP like actin nucleation promoting factor.
    
 0.703
ENSSARP00000001390
annotation not available
    
 
 0.656
ENSSARP00000008667
annotation not available
    
 
 0.639
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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