Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001448annotation not available (194 aa)    
Predicted Functional Partners:
SERP1
Stress associated endoplasmic reticulum protein 1.
    
 
 0.704
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.702
RANBP2
RAN binding protein 2.
    
  0.640
ENSSARP00000004843
annotation not available
    
 
 0.638
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
    
 
 0.637
RPL8
Ribosomal protein L8.
    
 
 0.631
ENSSARP00000008688
annotation not available
    
 
 0.630
ENSSARP00000000158
annotation not available
    
   0.629
KRTCAP2
Keratinocyte associated protein 2.
    
   0.629
ENSSARP00000001322
annotation not available
    
   0.629
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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