ENSSARP00000001449 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSARP00000001449

annotation not available (292 aa)

Predicted Functional Partners:

ENSSARP00000001142

0.981

TIMM8B

0.941

ENSSARP00000001428

0.912

CD3D

0.894

ENSSARP00000009341

0.820

TIMM22

0.816

ENSSARP00000008335

0.816

ENSSARP00000008437

0.816

SDHD

0.814

ENSSARP00000000550

0.775

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD3D	ENSSARP00000001428	ENSSARP00000001439	ENSSARP00000001428	CD3d molecule.	annotation not available	0.999
CD3D	ENSSARP00000001449	ENSSARP00000001439	ENSSARP00000001449	CD3d molecule.	annotation not available	0.894
ENSSARP00000000550	ENSSARP00000001142	ENSSARP00000000550	ENSSARP00000001142	annotation not available	annotation not available	0.992
ENSSARP00000000550	ENSSARP00000001449	ENSSARP00000000550	ENSSARP00000001449	annotation not available	annotation not available	0.775
ENSSARP00000000550	ENSSARP00000008335	ENSSARP00000000550	ENSSARP00000008335	annotation not available	annotation not available	0.729
ENSSARP00000000550	ENSSARP00000008437	ENSSARP00000000550	ENSSARP00000008437	annotation not available	annotation not available	0.729
ENSSARP00000000550	TIMM22	ENSSARP00000000550	ENSSARP00000007053	annotation not available	Translocase of inner mitochondrial membrane 22.	0.991
ENSSARP00000001142	ENSSARP00000000550	ENSSARP00000001142	ENSSARP00000000550	annotation not available	annotation not available	0.992
ENSSARP00000001142	ENSSARP00000001449	ENSSARP00000001142	ENSSARP00000001449	annotation not available	annotation not available	0.981
ENSSARP00000001142	ENSSARP00000008335	ENSSARP00000001142	ENSSARP00000008335	annotation not available	annotation not available	0.939
ENSSARP00000001142	ENSSARP00000008437	ENSSARP00000001142	ENSSARP00000008437	annotation not available	annotation not available	0.939
ENSSARP00000001142	ENSSARP00000009341	ENSSARP00000001142	ENSSARP00000009341	annotation not available	annotation not available	0.926
ENSSARP00000001142	SDHD	ENSSARP00000001142	ENSSARP00000003852	annotation not available	Succinate dehydrogenase complex subunit D.	0.906
ENSSARP00000001142	TIMM22	ENSSARP00000001142	ENSSARP00000007053	annotation not available	Translocase of inner mitochondrial membrane 22.	0.996
ENSSARP00000001142	TIMM8B	ENSSARP00000001142	ENSSARP00000003829	annotation not available	Translocase of inner mitochondrial membrane 8 homolog B.	0.998
ENSSARP00000001428	CD3D	ENSSARP00000001428	ENSSARP00000001439	annotation not available	CD3d molecule.	0.999
ENSSARP00000001428	ENSSARP00000001449	ENSSARP00000001428	ENSSARP00000001449	annotation not available	annotation not available	0.912
ENSSARP00000001449	CD3D	ENSSARP00000001449	ENSSARP00000001439	annotation not available	CD3d molecule.	0.894
ENSSARP00000001449	ENSSARP00000000550	ENSSARP00000001449	ENSSARP00000000550	annotation not available	annotation not available	0.775
ENSSARP00000001449	ENSSARP00000001142	ENSSARP00000001449	ENSSARP00000001142	annotation not available	annotation not available	0.981