Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDSUB1WD repeat, sterile alpha motif and U-box domain containing 1. (476 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.962
TTC37
Tetratricopeptide repeat domain 37.
    
 0.823
STRAP
Serine/threonine kinase receptor associated protein.
  
 
 0.811
CDC73
Cell division cycle 73.
    
 0.798
ENSSARP00000006031
annotation not available
    
 0.742
TAF9
TATA-box binding protein associated factor 9.
    
 0.721
DDX20
DEAD-box helicase 20.
    
 0.715
ENSSARP00000003012
annotation not available
    
 0.713
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.704
ENSSARP00000006808
annotation not available
    
 0.704
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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