Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COQ8ACoenzyme Q8A. (648 aa)    
Predicted Functional Partners:
COQ6
Coenzyme Q6, monooxygenase.
  
 0.981
ENSSARP00000003198
annotation not available
  
 0.973
COQ5
Coenzyme Q5, methyltransferase.
    
 
 0.892
COQ10B
Coenzyme Q10B.
    
 
 0.855
PDSS1
Decaprenyl diphosphate synthase subunit 1.
   
 
 0.850
SH3GLB1
SH3 domain containing GRB2 like, endophilin B1.
    
   0.835
ENSSARP00000010238
annotation not available
   
 
 0.824
ENSSARP00000011391
annotation not available
    
   0.795
LRRK2
Leucine rich repeat kinase 2.
    
   0.795
PDSS2
Decaprenyl diphosphate synthase subunit 2.
   
 
 0.784
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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