MROH2B protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

MROH2B

Maestro heat like repeat family member 2B. (1585 aa)

Predicted Functional Partners:

ENSSARP00000013100

0.806

ENSSARP00000009448

0.625

ENSSARP00000003516

0.621

CELSR2

0.604

YTHDC1

0.572

WASHC3

0.559

WASHC5

0.559

WASHC4

0.559

ENSSARP00000006464

0.558

ENSSARP00000006544

0.558

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

Export your current network:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CELSR2	ENSSARP00000003516	ENSSARP00000001229	ENSSARP00000003516	Cadherin EGF LAG seven-pass G-type receptor 2.	annotation not available	0.422
CELSR2	MROH2B	ENSSARP00000001229	ENSSARP00000001454	Cadherin EGF LAG seven-pass G-type receptor 2.	Maestro heat like repeat family member 2B.	0.604
ENSSARP00000003516	CELSR2	ENSSARP00000003516	ENSSARP00000001229	annotation not available	Cadherin EGF LAG seven-pass G-type receptor 2.	0.422
ENSSARP00000003516	MROH2B	ENSSARP00000003516	ENSSARP00000001454	annotation not available	Maestro heat like repeat family member 2B.	0.621
ENSSARP00000006464	ENSSARP00000013100	ENSSARP00000006464	ENSSARP00000013100	annotation not available	annotation not available	0.556
ENSSARP00000006464	MROH2B	ENSSARP00000006464	ENSSARP00000001454	annotation not available	Maestro heat like repeat family member 2B.	0.558
ENSSARP00000006544	ENSSARP00000009448	ENSSARP00000006544	ENSSARP00000009448	annotation not available	annotation not available	0.997
ENSSARP00000006544	ENSSARP00000013100	ENSSARP00000006544	ENSSARP00000013100	annotation not available	annotation not available	0.558
ENSSARP00000006544	MROH2B	ENSSARP00000006544	ENSSARP00000001454	annotation not available	Maestro heat like repeat family member 2B.	0.558
ENSSARP00000006544	WASHC3	ENSSARP00000006544	ENSSARP00000003426	annotation not available	WASH complex subunit 3.	0.998
ENSSARP00000006544	WASHC4	ENSSARP00000006544	ENSSARP00000012173	annotation not available	WASH complex subunit 4.	0.998
ENSSARP00000006544	WASHC5	ENSSARP00000006544	ENSSARP00000007863	annotation not available	WASH complex subunit 5.	0.998
ENSSARP00000009448	ENSSARP00000006544	ENSSARP00000009448	ENSSARP00000006544	annotation not available	annotation not available	0.997
ENSSARP00000009448	ENSSARP00000013100	ENSSARP00000009448	ENSSARP00000013100	annotation not available	annotation not available	0.625
ENSSARP00000009448	MROH2B	ENSSARP00000009448	ENSSARP00000001454	annotation not available	Maestro heat like repeat family member 2B.	0.625
ENSSARP00000009448	WASHC3	ENSSARP00000009448	ENSSARP00000003426	annotation not available	WASH complex subunit 3.	0.997
ENSSARP00000009448	WASHC4	ENSSARP00000009448	ENSSARP00000012173	annotation not available	WASH complex subunit 4.	0.997
ENSSARP00000009448	WASHC5	ENSSARP00000009448	ENSSARP00000007863	annotation not available	WASH complex subunit 5.	0.997
ENSSARP00000013100	ENSSARP00000006464	ENSSARP00000013100	ENSSARP00000006464	annotation not available	annotation not available	0.556
ENSSARP00000013100	ENSSARP00000006544	ENSSARP00000013100	ENSSARP00000006544	annotation not available	annotation not available	0.558