ENSSARP00000001461 protein (Sorex araneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

ENSSARP00000001461

annotation not available (587 aa)

Predicted Functional Partners:

NCBP2

0.980

ZCCHC8

0.978

ENSSARP00000009100

0.956

RBBP6

0.947

NCBP1

0.936

ACIN1

0.932

ENSSARP00000011752

0.923

SRRM1

0.923

SSRP1

0.915

ENSSARP00000001968

0.893

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACIN1	ENSSARP00000001461	ENSSARP00000010004	ENSSARP00000001461	Apoptotic chromatin condensation inducer 1.	annotation not available	0.932
ACIN1	ENSSARP00000009100	ENSSARP00000010004	ENSSARP00000009100	Apoptotic chromatin condensation inducer 1.	annotation not available	0.628
ACIN1	ENSSARP00000011752	ENSSARP00000010004	ENSSARP00000011752	Apoptotic chromatin condensation inducer 1.	annotation not available	0.933
ACIN1	NCBP1	ENSSARP00000010004	ENSSARP00000006596	Apoptotic chromatin condensation inducer 1.	Nuclear cap binding protein subunit 1.	0.677
ACIN1	NCBP2	ENSSARP00000010004	ENSSARP00000012929	Apoptotic chromatin condensation inducer 1.	Nuclear cap binding protein subunit 2.	0.844
ACIN1	SRRM1	ENSSARP00000010004	ENSSARP00000012389	Apoptotic chromatin condensation inducer 1.	Serine and arginine repetitive matrix 1.	0.881
ACIN1	SSRP1	ENSSARP00000010004	ENSSARP00000000914	Apoptotic chromatin condensation inducer 1.	Structure specific recognition protein 1.	0.475
ENSSARP00000001461	ACIN1	ENSSARP00000001461	ENSSARP00000010004	annotation not available	Apoptotic chromatin condensation inducer 1.	0.932
ENSSARP00000001461	ENSSARP00000001968	ENSSARP00000001461	ENSSARP00000001968	annotation not available	annotation not available	0.893
ENSSARP00000001461	ENSSARP00000009100	ENSSARP00000001461	ENSSARP00000009100	annotation not available	annotation not available	0.956
ENSSARP00000001461	ENSSARP00000011752	ENSSARP00000001461	ENSSARP00000011752	annotation not available	annotation not available	0.923
ENSSARP00000001461	NCBP1	ENSSARP00000001461	ENSSARP00000006596	annotation not available	Nuclear cap binding protein subunit 1.	0.936
ENSSARP00000001461	NCBP2	ENSSARP00000001461	ENSSARP00000012929	annotation not available	Nuclear cap binding protein subunit 2.	0.980
ENSSARP00000001461	RBBP6	ENSSARP00000001461	ENSSARP00000004529	annotation not available	RB binding protein 6, ubiquitin ligase.	0.947
ENSSARP00000001461	SRRM1	ENSSARP00000001461	ENSSARP00000012389	annotation not available	Serine and arginine repetitive matrix 1.	0.923
ENSSARP00000001461	SSRP1	ENSSARP00000001461	ENSSARP00000000914	annotation not available	Structure specific recognition protein 1.	0.915
ENSSARP00000001461	ZCCHC8	ENSSARP00000001461	ENSSARP00000003621	annotation not available	Zinc finger CCHC-type containing 8.	0.978
ENSSARP00000001968	ENSSARP00000001461	ENSSARP00000001968	ENSSARP00000001461	annotation not available	annotation not available	0.893
ENSSARP00000001968	ENSSARP00000009100	ENSSARP00000001968	ENSSARP00000009100	annotation not available	annotation not available	0.435
ENSSARP00000001968	ENSSARP00000011752	ENSSARP00000001968	ENSSARP00000011752	annotation not available	annotation not available	0.802