ENSSARP00000001464 protein (Sorex araneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

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Experiments

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[Homology]

Score

ENSSARP00000001464

annotation not available (307 aa)

Predicted Functional Partners:

TEX9

0.894

SKA3

0.818

ENSSARP00000002521

0.778

ENSSARP00000001032

0.727

ENSSARP00000002165

0.711

ZNF608

0.638

RAPGEF5

0.633

APCDD1

0.624

ENSSARP00000004235

0.619

ENSSARP00000012295

0.617

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APCDD1	ENSSARP00000001464	ENSSARP00000008631	ENSSARP00000001464	APC down-regulated 1.	annotation not available	0.624
APCDD1	ENSSARP00000002521	ENSSARP00000008631	ENSSARP00000002521	APC down-regulated 1.	annotation not available	0.601
APCDD1	ENSSARP00000004235	ENSSARP00000008631	ENSSARP00000004235	APC down-regulated 1.	annotation not available	0.619
APCDD1	ENSSARP00000012295	ENSSARP00000008631	ENSSARP00000012295	APC down-regulated 1.	annotation not available	0.589
APCDD1	ZNF608	ENSSARP00000008631	ENSSARP00000009865	APC down-regulated 1.	Zinc finger protein 608.	0.601
ENSSARP00000001032	ENSSARP00000001464	ENSSARP00000001032	ENSSARP00000001464	annotation not available	annotation not available	0.727
ENSSARP00000001464	APCDD1	ENSSARP00000001464	ENSSARP00000008631	annotation not available	APC down-regulated 1.	0.624
ENSSARP00000001464	ENSSARP00000001032	ENSSARP00000001464	ENSSARP00000001032	annotation not available	annotation not available	0.727
ENSSARP00000001464	ENSSARP00000002165	ENSSARP00000001464	ENSSARP00000002165	annotation not available	annotation not available	0.711
ENSSARP00000001464	ENSSARP00000002521	ENSSARP00000001464	ENSSARP00000002521	annotation not available	annotation not available	0.778
ENSSARP00000001464	ENSSARP00000004235	ENSSARP00000001464	ENSSARP00000004235	annotation not available	annotation not available	0.619
ENSSARP00000001464	ENSSARP00000012295	ENSSARP00000001464	ENSSARP00000012295	annotation not available	annotation not available	0.617
ENSSARP00000001464	RAPGEF5	ENSSARP00000001464	ENSSARP00000007334	annotation not available	Rap guanine nucleotide exchange factor 5.	0.633
ENSSARP00000001464	SKA3	ENSSARP00000001464	ENSSARP00000004468	annotation not available	Spindle and kinetochore associated complex subunit 3.	0.818
ENSSARP00000001464	TEX9	ENSSARP00000001464	ENSSARP00000009490	annotation not available	Testis expressed 9.	0.894
ENSSARP00000001464	ZNF608	ENSSARP00000001464	ENSSARP00000009865	annotation not available	Zinc finger protein 608.	0.638
ENSSARP00000002165	ENSSARP00000001464	ENSSARP00000002165	ENSSARP00000001464	annotation not available	annotation not available	0.711
ENSSARP00000002165	ENSSARP00000002521	ENSSARP00000002165	ENSSARP00000002521	annotation not available	annotation not available	0.603
ENSSARP00000002521	APCDD1	ENSSARP00000002521	ENSSARP00000008631	annotation not available	APC down-regulated 1.	0.601
ENSSARP00000002521	ENSSARP00000001464	ENSSARP00000002521	ENSSARP00000001464	annotation not available	annotation not available	0.778