STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP2ACharged multivesicular body protein 2A. (221 aa)    
Predicted Functional Partners:
CHMP5
Charged multivesicular body protein 5.
   
 0.999
CHMP4C
Charged multivesicular body protein 4C.
   
 0.999
CHMP4B
Charged multivesicular body protein 4B.
   
 0.999
CHMP7
Charged multivesicular body protein 7.
    
 0.999
ENSSARP00000000655
annotation not available
    
 0.998
ENSSARP00000008064
annotation not available
   
 0.998
VPS4B
Vacuolar protein sorting 4 homolog B.
    
 0.997
VPS25
Vacuolar protein sorting 25 homolog.
   
 0.995
SNF8
SNF8 subunit of ESCRT-II.
   
 0.994
ENSSARP00000012128
annotation not available
    
 0.994
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.