STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COA3Cytochrome c oxidase assembly factor 3 homolog, mitochondrial. (106 aa)    
Predicted Functional Partners:
COA6
Cytochrome c oxidase assembly factor 6.
   
  
 0.727
COX5A
Cytochrome c oxidase subunit 5A.
   
 
 0.611
COA5
Cytochrome c oxidase assembly factor 5.
   
  
 0.554
TACO1
Translational activator of cytochrome c oxidase 1.
    
 
 0.548
CMC1
C-X9-C motif containing 1.
   
 
 0.532
COX5B
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 
 0.531
ENSSARP00000006051
annotation not available
   
  
 0.530
ENSSARP00000007574
annotation not available
    
 
 0.530
NDUFA4
NDUFA4 mitochondrial complex associated.
   
 
 0.459
C12orf66
Chromosome unknown open reading frame, human C12orf66.
      
 0.452
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.