Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001479annotation not available (928 aa)    
Predicted Functional Partners:
RRP36
Ribosomal RNA processing 36.
   
  0.790
KRR1
KRR1 small subunit processome component homolog.
   
  0.790
NOL6
Nucleolar protein 6.
    
 0.789
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
    
  0.785
UTP6
UTP6 small subunit processome component.
    
  0.785
DHX15
DEAH-box helicase 15.
    
 0.744
WAC
WW domain containing adaptor with coiled-coil.
     
 0.740
DAZAP1
DAZ associated protein 1.
     
 0.712
PDE4B
Phosphodiesterase 4B.
      
 0.685
SUGP2
SURP and G-patch domain containing 2.
    
 0.642
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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