STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001479annotation not available (928 aa)    
Predicted Functional Partners:
NOL6
Nucleolar protein 6.
    
 0.774
UTP6
UTP6 small subunit processome component.
    
 0.771
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
    
  0.769
RRP36
Ribosomal RNA processing 36.
   
  0.768
DHX15
DEAH-box helicase 15.
    
 0.768
DDX10
DEAD-box helicase 10.
    
 0.747
PDE4B
Phosphodiesterase 4B.
    
 
 0.746
KRR1
KRR1 small subunit processome component homolog.
    
  0.738
ENSSARP00000000733
annotation not available
      
 0.691
ENSSARP00000007784
annotation not available
    
 
 0.690
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.