STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001487annotation not available (252 aa)    
Predicted Functional Partners:
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
  
 
 0.876
ENSSARP00000012874
annotation not available
    
   0.780
COPB2
Coatomer protein complex subunit beta 2.
    
   0.729
ENSSARP00000007825
annotation not available
    
 0.675
ENSSARP00000009227
annotation not available
    
 0.675
OAT
Ornithine aminotransferase.
  
  
 0.656
ENSSARP00000003041
annotation not available
   
 0.615
MED1
Mediator complex subunit 1.
    
  0.606
CCDC47
Coiled-coil domain containing 47.
    
  0.594
DNAJC15
DnaJ heat shock protein family (Hsp40) member C15.
      
 0.583
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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