Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001490annotation not available (80 aa)    
Predicted Functional Partners:
ENSSARP00000001472
annotation not available
  
 
  0.597
VPREB1
V-set pre-B cell surrogate light chain 1.
     
  0.576
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
     
  0.546
ENSSARP00000000296
annotation not available
    
  0.513
ENSSARP00000006637
annotation not available
    
  0.513
SIRPB2
Signal regulatory protein beta 2.
    
  0.487
ENSSARP00000012548
annotation not available
    
  0.487
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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